Citing BiQ Analyzer
This program has been developed in a
cooperation between the Max-Planck-Institute
for Informatics and Saarland
University, both situated in Saarbrücken, Germany.
If you use BiQ Analyzer for analyzing OxBiS/TAB-seq and similar assays please cite: Becker, D., Lutsik, P., Ebert, P., Bock, C., Lengauer, T., & Walter, J. (2014). BiQ Analyzer HiMod: an interactive software tool for high-throughput locus-specific analysis of 5-methylcytosine and its oxidized derivatives. Nucleic Acids Research, 42 (Web Server issue), W501–7. doi:10.1093/nar/gku457 Full text. |
If you use BiQ Analyzer for ordinary bisulfite sequencing please cite: Lutsik, P., Feuerbach, L., Arand, J., Lengauer, T., Walter, J., & Bock, C. (2011). BiQ Analyzer HT: locus-specific analysis of DNA methylation by high-throughput bisulfite sequencing. Nucleic Acids Research, 39 (Web Server issue), W551–6. doi:10.1093/nar/gkr312 Full text. |
If you use BiQ Analyzer "classic" for clonal bisulfite sequencing please cite: Bock, C., Reither, S., Mikeska, T., Paulsen, M., Walter, J., & Lengauer, T. (2005). BiQ Analyzer: visualization and quality control for DNA methylation data from bisulfite sequencing. Bioinformatics (Oxford, England), 21(21), 4067–8. doi:10.1093/bioinformatics/bti652 Full text |
Credits
BiQ Analyzer is a collaborative project of the following research groups:
Computational Biology & Applied Algorithmics, MPII, - Max Planck Institute for Informatics (Professor Thomas Lengauer). | |
Department of EpiGenetics, Saarland University (Professor Joern Walter). | |
CeMM, - Research Center for Molecular Medicine of the Austrian Academy of Sciences (Christoph Bock). |
People
These people contributed to the development of BiQ Analyzer in different years:
Developers:
- Christoph Bock
- Pavlo Lutsik
- Daniel Becker
- Adrian Mang
Webmasters:
- Stefanie Geisen
- Georg Friedrich
- Achim Büch
People who also contributed to BiQ Analyzer development:
- Lars Feuerbach
- Julia Arand
- Peter Ebert
- Juliane Perner
- Sabine Reither
- Martina Paulsen
- Thomas Mikeska
- Yassen Assenov
- Sascha Tierling
- Dirk Schuemacher